Open Compute

Open Compute is a powerful Python library that uses AI agents to transform patient journeys into standards-compliant FHIR (Fast Healthcare Interoperability Resources) data. Built by Jori Health, this tool enables healthcare developers to bridge the gap between narrative patient experiences and structured healthcare data.

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problem

Clinical data exists in fragmented, unstructured formats across healthcare systems. Patient journeys are documented as narrative text that is difficult for machines to process. Converting this data into standards-compliant FHIR format requires extensive manual effort and domain expertise, creating a bottleneck for healthcare interoperability and research.

solution

Open Compute uses AI agents to automatically read and understand narrative patient journeys, then transform them into structured, standards-compliant FHIR resources. The open-source Python library handles the complex mapping between unstructured clinical text and FHIR data models, enabling healthcare developers to bridge the gap between narrative patient experiences and interoperable healthcare data at scale.

Opening the Black Box of Healthcare Data


Open Compute grew out of a frustration that anyone who has worked in health-tech knows intimately: clinical data is a mess. Patient journeys live trapped in unstructured text across fragmented systems. Meanwhile, the healthcare industry has spent decades building standards like FHIR to structure this data, but the gap between raw clinical narratives and clean, standards-compliant FHIR resources remains enormous.

The idea was deceptively simple: what if AI agents could read patient journeys the way a clinician does, and automatically transform them into structured FHIR data? Not through brittle rule-based parsers, but through genuine language understanding that can interpret context, resolve ambiguity, and map clinical concepts to the correct FHIR resources with the precision that healthcare demands.

Built as an open-source Python library at Jori Health, Open Compute uses a pipeline of specialized AI agents, each responsible for a different aspect of the transformation. One agent extracts clinical entities. Another maps them to standardized medical ontologies. A third constructs valid FHIR resources. The agents collaborate, cross-check each other, and produce output with full provenance tracking.

The decision to make Open Compute open-source was deliberate. Healthcare interoperability is too important to be locked behind proprietary walls. By releasing the library publicly, the goal was to give every health-tech developer access to the same AI-powered data transformation capabilities.

Open Compute represents a conviction that the hardest problems in healthcare are not medical — they are computational. The data exists. The standards exist. What was missing was the intelligence to connect them. That is what Open Compute provides: an AI-native layer that turns clinical narrative chaos into structured, interoperable data.

year

2024

timeframe

2024 - Present

tools

Python, AI Agents, FHIR, LLMs, Healthcare Data, Open Source

category

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i'm open for projects, feel free to email me to see how can we collaborate

.say hello

i'm open for projects, feel free to email me to see how can we collaborate